Alignment of MicrobiomeFunction objects — MicrobiomeFunctionAlignment • fsmc

Alignment of MicrobiomeFunction objects

Usage

MicrobiomeFunctionAlignment(
  ...,
  name = NA_character_,
  min_rxn = 1,
  min_mb = 2,
  pairwise = FALSE
)

Arguments

...: A minimum of two Microbiome Function objects.
name: Character scaler specifying a name or ID for the Alignment.
min_rxn: Numeric scalar giving the minimum fraction of reactions.
min_mb: Numeric scalar giving the minimum fraction of microbiomes.
pairwise: Boolean scalar to toggle pairwise / multiple alignment.